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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL26006.1SH3 domain-containing protein. (259 aa)    
Predicted Functional Partners:
SCL13655.1
Peptidase family M23.
  
     0.772
SCL26707.1
D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family.
  
 
  0.625
SCL15750.1
Membrane carboxypeptidase (penicillin-binding protein).
  
  
  0.595
SCL21827.1
Membrane carboxypeptidase (penicillin-binding protein).
  
  
  0.580
SCL26003.1
Hypothetical protein.
       0.573
SCL24435.1
Membrane carboxypeptidase (penicillin-binding protein).
  
  
  0.569
SCL13083.1
Membrane carboxypeptidase (penicillin-binding protein).
  
  
  0.564
SCL14911.1
Membrane carboxypeptidase (penicillin-binding protein).
  
  
  0.558
SCL15801.1
N-acetylmuramoyl-L-alanine amidase.
    
 0.536
SCL26014.1
Ferredoxin.
       0.480
Your Current Organism:
Micromonospora inyonensis
NCBI taxonomy Id: 47866
Other names: ATCC 27600, DSM 46123, JCM 3188, M. inyonensis, Micromonospora inyoensis, Micromonospora inyonensis Kroppenstedt et al. 2005, NBRC 13156, NRRL 3292
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