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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL26083.1ATP-grasp domain-containing protein. (366 aa)    
Predicted Functional Partners:
SCL26072.1
Radical SAM superfamily enzyme, MoaA/NifB/PqqE/SkfB family.
 
    0.968
SCL26077.1
Oxygen-independent coproporphyrinogen-3 oxidase.
 
    0.968
SCL26080.1
Sulfatase.
 
     0.968
SCL26088.1
Hypothetical protein.
  
    0.809
SCL26288.1
Hypothetical protein.
 
    0.809
SCL26285.1
Hypothetical protein.
 
    0.797
SCL23810.1
Glutamate synthase (NADH) large subunit.
    
 0.761
SCL26065.1
Hypothetical protein.
 
     0.635
SCL17733.1
Hypothetical protein.
  
     0.544
SCL13402.1
Mycoredoxin.
    
 0.541
Your Current Organism:
Micromonospora inyonensis
NCBI taxonomy Id: 47866
Other names: ATCC 27600, DSM 46123, JCM 3188, M. inyonensis, Micromonospora inyoensis, Micromonospora inyonensis Kroppenstedt et al. 2005, NBRC 13156, NRRL 3292
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