STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL26253.1Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family. (298 aa)    
Predicted Functional Partners:
SCL26264.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
  0.897
SCL26259.1
Amino acid ABC transporter membrane protein, PAAT family.
  0.893
SCL23903.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
  0.851
SCL25081.1
Amino acid ABC transporter membrane protein, PAAT family.
  0.851
SCL25085.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
  0.849
SCL29044.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
  0.849
SCL31750.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
  0.847
SCL29033.1
Polar amino acid transport system permease protein.
 
  0.843
SCL29038.1
Amino acid ABC transporter membrane protein, PAAT family.
 
  0.842
SCL23900.1
Amino acid ABC transporter membrane protein, PAAT family.
  0.838
Your Current Organism:
Micromonospora inyonensis
NCBI taxonomy Id: 47866
Other names: ATCC 27600, DSM 46123, JCM 3188, M. inyonensis, Micromonospora inyoensis, Micromonospora inyonensis Kroppenstedt et al. 2005, NBRC 13156, NRRL 3292
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