Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SCL26285.1Hypothetical protein. (315 aa)    
Predicted Functional Partners:
SCL26072.1
Radical SAM superfamily enzyme, MoaA/NifB/PqqE/SkfB family.
 
    0.841
SCL26077.1
Oxygen-independent coproporphyrinogen-3 oxidase.
 
    0.800
SCL26083.1
ATP-grasp domain-containing protein.
 
    0.795
SCL26080.1
Sulfatase.
 
     0.791
SCL26288.1
Hypothetical protein.
 
    
0.791
SCL12874.1
Hypothetical protein.
  
     0.599
SCL26281.1
Hypothetical protein.
       0.581
SCL19474.1
Hypothetical protein.
  
     0.532
SCL26065.1
Hypothetical protein.
  
     0.522
SCL12990.1
Hypothetical protein.
  
     0.499
Your Current Organism:
Micromonospora inyonensis
NCBI taxonomy Id: 47866
Other names: ATCC 27600, DSM 46123, JCM 3188, M. inyonensis, Micromonospora inyoensis, Micromonospora inyonensis Kroppenstedt et al. 2005, NBRC 13156, NRRL 3292
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