Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCL13373.1 | SCL26439.1 | GA0074694_0294 | GA0074694_4519 | Anti-sigma regulatory factor (Ser/Thr protein kinase). | Hypothetical protein. | 0.443 |
SCL13749.1 | SCL26439.1 | GA0074694_0464 | GA0074694_4519 | Cellulose binding domain-containing protein. | Hypothetical protein. | 0.419 |
SCL26435.1 | SCL26439.1 | GA0074694_4518 | GA0074694_4519 | Cu2+-exporting ATPase. | Hypothetical protein. | 0.497 |
SCL26439.1 | SCL13373.1 | GA0074694_4519 | GA0074694_0294 | Hypothetical protein. | Anti-sigma regulatory factor (Ser/Thr protein kinase). | 0.443 |
SCL26439.1 | SCL13749.1 | GA0074694_4519 | GA0074694_0464 | Hypothetical protein. | Cellulose binding domain-containing protein. | 0.419 |
SCL26439.1 | SCL26435.1 | GA0074694_4519 | GA0074694_4518 | Hypothetical protein. | Cu2+-exporting ATPase. | 0.497 |
SCL26439.1 | SCL26443.1 | GA0074694_4519 | GA0074694_4520 | Hypothetical protein. | D-amino-acid:oxygen oxidoreductase. | 0.446 |
SCL26439.1 | SCL26583.1 | GA0074694_4519 | GA0074694_4562 | Hypothetical protein. | Histidine kinase-like ATPase domain-containing protein. | 0.465 |
SCL26439.1 | SCL29373.1 | GA0074694_4519 | GA0074694_5384 | Hypothetical protein. | Hypothetical protein. | 0.405 |
SCL26439.1 | egtD | GA0074694_4519 | GA0074694_4834 | Hypothetical protein. | L-histidine Nalpha-methyltransferase; Catalyzes the SAM-dependent triple methylation of the alpha- amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine; Belongs to the methyltransferase superfamily. EgtD family. | 0.544 |
SCL26443.1 | SCL26439.1 | GA0074694_4520 | GA0074694_4519 | D-amino-acid:oxygen oxidoreductase. | Hypothetical protein. | 0.446 |
SCL26583.1 | SCL26439.1 | GA0074694_4562 | GA0074694_4519 | Histidine kinase-like ATPase domain-containing protein. | Hypothetical protein. | 0.465 |
SCL29373.1 | SCL26439.1 | GA0074694_5384 | GA0074694_4519 | Hypothetical protein. | Hypothetical protein. | 0.405 |
egtD | SCL26439.1 | GA0074694_4834 | GA0074694_4519 | L-histidine Nalpha-methyltransferase; Catalyzes the SAM-dependent triple methylation of the alpha- amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine; Belongs to the methyltransferase superfamily. EgtD family. | Hypothetical protein. | 0.544 |