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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL27005.1Ca2+:H+ antiporter. (381 aa)    
Predicted Functional Partners:
SCL15876.1
ATPase, P-type (transporting), HAD superfamily, subfamily IC.
    
 
 0.602
SCL28148.1
Sodium/proton antiporter, CPA1 family; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.
  
 
 
 0.561
vapC
Hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
  
     0.538
SCL27009.1
Glycerophosphoryl diester phosphodiesterase.
       0.517
SCL27015.1
MFS transporter, UMF1 family.
       0.484
SCL29459.1
Ca2+-transporting ATPase.
    
 
 0.476
SCL27003.1
1-acyl-sn-glycerol-3-phosphate acyltransferases.
  
    0.460
SCL30123.1
NhaP-type Na+/H+ or K+/H+ antiporter.
    
 
 0.418
SCL31837.1
Multisubunit sodium/proton antiporter, MrpA subunit /multisubunit sodium/proton antiporter, MrpB subunit.
      
 0.418
SCL27017.1
Thymidine kinase.
       0.407
Your Current Organism:
Micromonospora inyonensis
NCBI taxonomy Id: 47866
Other names: ATCC 27600, DSM 46123, JCM 3188, M. inyonensis, Micromonospora inyoensis, Micromonospora inyonensis Kroppenstedt et al. 2005, NBRC 13156, NRRL 3292
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