STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL27609.1Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase). (459 aa)    
Predicted Functional Partners:
SCL22836.1
2-oxoisovalerate dehydrogenase E1 component.
 
 0.998
SCL27613.1
Pyruvate dehydrogenase E1 component beta subunit.
 
 0.998
SCL27618.1
Pyruvate dehydrogenase E1 component alpha subunit.
 
 0.998
SCL13293.1
2-oxoglutarate dehydrogenase E1 component.
 
0.995
SCL16103.1
Pyruvate dehydrogenase E1 component beta subunit.
 
 0.994
SCL16105.1
Pyruvate dehydrogenase E1 component alpha subunit.
 
 0.992
SCL23146.1
Dihydrolipoamide dehydrogenase.
 0.990
SCL25384.1
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
 
 0.985
SCL22807.1
Pyruvate dehydrogenase E1 component; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
 
 0.980
pdhA
Pyruvate dehydrogenase E1 component alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
 
 0.977
Your Current Organism:
Micromonospora inyonensis
NCBI taxonomy Id: 47866
Other names: ATCC 27600, DSM 46123, JCM 3188, M. inyonensis, Micromonospora inyoensis, Micromonospora inyonensis Kroppenstedt et al. 2005, NBRC 13156, NRRL 3292
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