Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SCL16660.1 | SCL19631.1 | GA0074694_1708 | GA0074694_2761 | Signal transduction histidine kinase. | Cyclic nucleotide-binding domain-containing protein. | 0.999 |
| SCL16660.1 | SCL20357.1 | GA0074694_1708 | GA0074694_3011 | Signal transduction histidine kinase. | Nitrogen regulatory protein P-II family; Belongs to the P(II) protein family. | 0.653 |
| SCL16660.1 | SCL23263.1 | GA0074694_1708 | GA0074694_3599 | Signal transduction histidine kinase. | WD40 repeat. | 0.979 |
| SCL16660.1 | SCL25845.1 | GA0074694_1708 | GA0074694_4340 | Signal transduction histidine kinase. | NACHT domain-containing protein. | 0.979 |
| SCL16660.1 | SCL25849.1 | GA0074694_1708 | GA0074694_4341 | Signal transduction histidine kinase. | WD40 repeat. | 0.980 |
| SCL16660.1 | SCL27076.1 | GA0074694_1708 | GA0074694_4703 | Signal transduction histidine kinase. | GAF domain-containing protein. | 0.999 |
| SCL16660.1 | SCL27822.1 | GA0074694_1708 | GA0074694_4924 | Signal transduction histidine kinase. | Helix-turn-helix domain-containing protein. | 0.902 |
| SCL16660.1 | SCL28095.1 | GA0074694_1708 | GA0074694_5006 | Signal transduction histidine kinase. | WD40 repeat. | 0.979 |
| SCL19631.1 | SCL16660.1 | GA0074694_2761 | GA0074694_1708 | Cyclic nucleotide-binding domain-containing protein. | Signal transduction histidine kinase. | 0.999 |
| SCL19631.1 | SCL23263.1 | GA0074694_2761 | GA0074694_3599 | Cyclic nucleotide-binding domain-containing protein. | WD40 repeat. | 0.636 |
| SCL19631.1 | SCL25845.1 | GA0074694_2761 | GA0074694_4340 | Cyclic nucleotide-binding domain-containing protein. | NACHT domain-containing protein. | 0.636 |
| SCL19631.1 | SCL25849.1 | GA0074694_2761 | GA0074694_4341 | Cyclic nucleotide-binding domain-containing protein. | WD40 repeat. | 0.636 |
| SCL19631.1 | SCL27076.1 | GA0074694_2761 | GA0074694_4703 | Cyclic nucleotide-binding domain-containing protein. | GAF domain-containing protein. | 0.999 |
| SCL19631.1 | SCL27822.1 | GA0074694_2761 | GA0074694_4924 | Cyclic nucleotide-binding domain-containing protein. | Helix-turn-helix domain-containing protein. | 0.929 |
| SCL19631.1 | SCL28095.1 | GA0074694_2761 | GA0074694_5006 | Cyclic nucleotide-binding domain-containing protein. | WD40 repeat. | 0.636 |
| SCL19631.1 | rpoA | GA0074694_2761 | GA0074694_0530 | Cyclic nucleotide-binding domain-containing protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.924 |
| SCL20357.1 | SCL16660.1 | GA0074694_3011 | GA0074694_1708 | Nitrogen regulatory protein P-II family; Belongs to the P(II) protein family. | Signal transduction histidine kinase. | 0.653 |
| SCL20357.1 | SCL27822.1 | GA0074694_3011 | GA0074694_4924 | Nitrogen regulatory protein P-II family; Belongs to the P(II) protein family. | Helix-turn-helix domain-containing protein. | 0.890 |
| SCL23263.1 | SCL16660.1 | GA0074694_3599 | GA0074694_1708 | WD40 repeat. | Signal transduction histidine kinase. | 0.979 |
| SCL23263.1 | SCL19631.1 | GA0074694_3599 | GA0074694_2761 | WD40 repeat. | Cyclic nucleotide-binding domain-containing protein. | 0.636 |
page 1 of 5