STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL28349.1Hypothetical protein. (339 aa)    
Predicted Functional Partners:
SCL28356.1
FAD dependent oxidoreductase.
 
     0.810
SCL28351.1
DNA-binding transcriptional regulator, LacI/PurR family; Manually curated.
 
 
 0.794
SCL28360.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
     0.792
SCL24342.1
Alpha-1,6-glucosidases, pullulanase-type; Belongs to the glycosyl hydrolase 13 family.
 
 
 0.728
SCL17020.1
Acyl transferase domain-containing protein.
  
 
 0.714
SCL27723.1
FAD dependent oxidoreductase.
 
     0.713
SCL30334.1
Acyl transferase domain-containing protein.
   
 
 0.666
SCL24141.1
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.543
SCL24453.1
Intein N-terminal splicing region/RHS repeat-associated core domain-containing protein.
  
     0.515
pfp
Pyrophosphate-dependent phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions.
   
 
 0.500
Your Current Organism:
Micromonospora inyonensis
NCBI taxonomy Id: 47866
Other names: ATCC 27600, DSM 46123, JCM 3188, M. inyonensis, Micromonospora inyoensis, Micromonospora inyonensis Kroppenstedt et al. 2005, NBRC 13156, NRRL 3292
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