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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL28356.1FAD dependent oxidoreductase. (544 aa)    
Predicted Functional Partners:
SCL13483.1
Succinate dehydrogenase / fumarate reductase iron-sulfur subunit.
  
 0.992
SCL30480.1
Succinate dehydrogenase / fumarate reductase iron-sulfur subunit.
  
 0.992
SCL13293.1
2-oxoglutarate dehydrogenase E1 component.
  
 0.976
SCL14659.1
Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
  
 
 0.953
SCL22629.1
Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
  
 
 0.953
SCL13454.1
NAD-dependent dihydropyrimidine dehydrogenase, PreA subunit; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
  
 0.951
SCL28360.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
     0.945
SCL18177.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
 
 0.917
SCL28351.1
DNA-binding transcriptional regulator, LacI/PurR family; Manually curated.
 
 
   0.902
SCL28364.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
     0.853
Your Current Organism:
Micromonospora inyonensis
NCBI taxonomy Id: 47866
Other names: ATCC 27600, DSM 46123, JCM 3188, M. inyonensis, Micromonospora inyoensis, Micromonospora inyonensis Kroppenstedt et al. 2005, NBRC 13156, NRRL 3292
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