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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL28367.1Carbohydrate ABC transporter membrane protein 2, CUT1 family. (280 aa)    
Predicted Functional Partners:
SCL28364.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 0.993
SCL28360.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
 0.987
SCL14638.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
 0.953
SCL24534.1
N-acetylglucosamine transport system permease protein.
 0.952
SCL14364.1
Cellobiose transport system permease protein.
 0.945
SCL17238.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.945
SCL24565.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  0.943
SCL14242.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 0.937
SCL25787.1
Sn-glycerol 3-phosphate transport system permease protein.
 0.937
SCL27930.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 0.937
Your Current Organism:
Micromonospora inyonensis
NCBI taxonomy Id: 47866
Other names: ATCC 27600, DSM 46123, JCM 3188, M. inyonensis, Micromonospora inyoensis, Micromonospora inyonensis Kroppenstedt et al. 2005, NBRC 13156, NRRL 3292
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