Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCL13110.1 | SCL13638.1 | GA0074694_0163 | GA0074694_0420 | Hydrophobic/amphiphilic exporter-1, HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Interferon-induced transmembrane protein. | 0.977 |
SCL13110.1 | SCL16660.1 | GA0074694_0163 | GA0074694_1708 | Hydrophobic/amphiphilic exporter-1, HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Signal transduction histidine kinase. | 0.611 |
SCL13110.1 | SCL30494.1 | GA0074694_0163 | GA0074694_5710 | Hydrophobic/amphiphilic exporter-1, HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Multidrug efflux pump subunit AcrA (membrane-fusion protein). | 0.985 |
SCL13638.1 | SCL13110.1 | GA0074694_0420 | GA0074694_0163 | Interferon-induced transmembrane protein. | Hydrophobic/amphiphilic exporter-1, HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.977 |
SCL13638.1 | SCL16660.1 | GA0074694_0420 | GA0074694_1708 | Interferon-induced transmembrane protein. | Signal transduction histidine kinase. | 0.778 |
SCL13638.1 | SCL27031.1 | GA0074694_0420 | GA0074694_4689 | Interferon-induced transmembrane protein. | ABC-type lipoprotein export system, ATPase component. | 0.501 |
SCL13638.1 | SCL27034.1 | GA0074694_0420 | GA0074694_4690 | Interferon-induced transmembrane protein. | Hypothetical protein. | 0.501 |
SCL13638.1 | SCL28517.1 | GA0074694_0420 | GA0074694_5136 | Interferon-induced transmembrane protein. | Putative ABC transport system ATP-binding protein. | 0.501 |
SCL13638.1 | SCL30487.1 | GA0074694_0420 | GA0074694_5708 | Interferon-induced transmembrane protein. | Putative ABC transport system permease protein. | 0.950 |
SCL13638.1 | SCL30490.1 | GA0074694_0420 | GA0074694_5709 | Interferon-induced transmembrane protein. | Putative ABC transport system ATP-binding protein. | 0.501 |
SCL13638.1 | SCL30494.1 | GA0074694_0420 | GA0074694_5710 | Interferon-induced transmembrane protein. | Multidrug efflux pump subunit AcrA (membrane-fusion protein). | 0.979 |
SCL16660.1 | SCL13110.1 | GA0074694_1708 | GA0074694_0163 | Signal transduction histidine kinase. | Hydrophobic/amphiphilic exporter-1, HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.611 |
SCL16660.1 | SCL13638.1 | GA0074694_1708 | GA0074694_0420 | Signal transduction histidine kinase. | Interferon-induced transmembrane protein. | 0.778 |
SCL16660.1 | SCL30487.1 | GA0074694_1708 | GA0074694_5708 | Signal transduction histidine kinase. | Putative ABC transport system permease protein. | 0.511 |
SCL16660.1 | SCL30494.1 | GA0074694_1708 | GA0074694_5710 | Signal transduction histidine kinase. | Multidrug efflux pump subunit AcrA (membrane-fusion protein). | 0.753 |
SCL16660.1 | SCL30505.1 | GA0074694_1708 | GA0074694_5713 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.991 |
SCL27031.1 | SCL13638.1 | GA0074694_4689 | GA0074694_0420 | ABC-type lipoprotein export system, ATPase component. | Interferon-induced transmembrane protein. | 0.501 |
SCL27031.1 | SCL27034.1 | GA0074694_4689 | GA0074694_4690 | ABC-type lipoprotein export system, ATPase component. | Hypothetical protein. | 0.652 |
SCL27031.1 | SCL30487.1 | GA0074694_4689 | GA0074694_5708 | ABC-type lipoprotein export system, ATPase component. | Putative ABC transport system permease protein. | 0.993 |
SCL27031.1 | SCL30494.1 | GA0074694_4689 | GA0074694_5710 | ABC-type lipoprotein export system, ATPase component. | Multidrug efflux pump subunit AcrA (membrane-fusion protein). | 0.844 |
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