STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL30515.1Beta-lactamase class A. (301 aa)    
Predicted Functional Partners:
SCL28235.1
Beta-lactamase class A.
 
  
  0.820
SCL18946.1
Type VII secretion protein EccE.
  
     0.673
SCL14535.1
Calcineurin-like phosphoesterase.
  
     0.659
SCL30520.1
L-ascorbate metabolism protein UlaG, beta-lactamase superfamily.
       0.620
SCL18923.1
WXG100 family type VII secretion target; Belongs to the WXG100 family.
  
     0.576
SCL28145.1
Ricin-type beta-trefoil lectin domain-containing protein.
  
     0.574
SCL19720.1
Methyltransferase domain-containing protein.
  
     0.534
SCL15465.1
Biotin carboxylase.
  
     0.527
SCL17831.1
Hypothetical protein.
  
     0.512
SCL17809.1
Replication-relaxation.
  
     0.505
Your Current Organism:
Micromonospora inyonensis
NCBI taxonomy Id: 47866
Other names: ATCC 27600, DSM 46123, JCM 3188, M. inyonensis, Micromonospora inyoensis, Micromonospora inyonensis Kroppenstedt et al. 2005, NBRC 13156, NRRL 3292
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.