STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL52176.1Hypothetical protein. (384 aa)    
Predicted Functional Partners:
SCL66991.1
Hypothetical protein.
  
     0.774
SCL67001.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
  
     0.774
SCL73794.1
Capsular polysaccharide biosynthesis protein.
 
     0.773
SCL72314.1
Hypothetical protein.
 
     0.771
SCL72048.1
Cupin-like domain-containing protein.
  
     0.764
SCL72064.1
Hypothetical protein.
  
     0.750
SCL54480.1
Thioesterase domain-containing protein.
  
     0.747
SCL66429.1
Hypothetical protein.
  
     0.746
SCL69200.1
Hypothetical protein.
  
     0.731
SCL73793.1
O-antigen ligase.
  
    0.726
Your Current Organism:
Micromonospora peucetia
NCBI taxonomy Id: 47871
Other names: DSM 43363, JCM 12820, M. peucetia, Micromonospora peucetia Kroppenstedt et al. 2005, Micromonospora peucetica, NBRC 101886
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.