STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SCL53861.1N-Dimethylarginine dimethylaminohydrolase. (269 aa)    
Predicted Functional Partners:
SCL68765.1
Glutamate synthase (NADH) large subunit.
   
 
  0.861
SCL64824.1
Ornithine--oxo-acid transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 0.812
SCL53868.1
Uncharacterized conserved protein, conains N-terminal glutamine amidotransferase (GATase1)-like domain.
       0.800
SCL53875.1
Uncharacterized membrane protein YeiB.
       0.773
SCL53881.1
Biotin-protein ligase, N terminal.
       0.753
SCL58886.1
N-Dimethylarginine dimethylaminohydrolase; Manually curated.
  
  
 
0.736
SCL64830.1
N-Dimethylarginine dimethylaminohydrolase.
  
  
 
0.721
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
  0.702
argD
Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
  
 
 0.696
SCL73768.1
Guanylate kinase; Manually curated.
    
  0.682
Your Current Organism:
Micromonospora peucetia
NCBI taxonomy Id: 47871
Other names: DSM 43363, JCM 12820, M. peucetia, Micromonospora peucetia Kroppenstedt et al. 2005, Micromonospora peucetica, NBRC 101886
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