Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCL45538.1 | SCL56300.1 | GA0070608_0015 | GA0070608_1630 | Nucleotidyl transferase AbiEii toxin, Type IV TA system. | ABC-2 type transport system ATP-binding protein. | 0.405 |
SCL45538.1 | SCL56306.1 | GA0070608_0015 | GA0070608_1631 | Nucleotidyl transferase AbiEii toxin, Type IV TA system. | ABC-2 type transport system permease protein. | 0.601 |
SCL51074.1 | SCL55303.1 | GA0070608_0799 | GA0070608_1470 | Glycosyltransferase involved in cell wall bisynthesis. | ABC-2 type transport system ATP-binding protein. | 0.714 |
SCL51074.1 | SCL56306.1 | GA0070608_0799 | GA0070608_1631 | Glycosyltransferase involved in cell wall bisynthesis. | ABC-2 type transport system permease protein. | 0.706 |
SCL51074.1 | SCL73528.1 | GA0070608_0799 | GA0070608_5822 | Glycosyltransferase involved in cell wall bisynthesis. | Uncharacterised nucleotidyltransferase. | 0.804 |
SCL51074.1 | SCL74027.1 | GA0070608_0799 | GA0070608_6347 | Glycosyltransferase involved in cell wall bisynthesis. | Teichoic acid transport system ATP-binding protein. | 0.746 |
SCL55303.1 | SCL51074.1 | GA0070608_1470 | GA0070608_0799 | ABC-2 type transport system ATP-binding protein. | Glycosyltransferase involved in cell wall bisynthesis. | 0.714 |
SCL55303.1 | SCL56306.1 | GA0070608_1470 | GA0070608_1631 | ABC-2 type transport system ATP-binding protein. | ABC-2 type transport system permease protein. | 0.982 |
SCL55303.1 | SCL73528.1 | GA0070608_1470 | GA0070608_5822 | ABC-2 type transport system ATP-binding protein. | Uncharacterised nucleotidyltransferase. | 0.829 |
SCL56293.1 | SCL56300.1 | GA0070608_1629 | GA0070608_1630 | DNA helicase IV. | ABC-2 type transport system ATP-binding protein. | 0.608 |
SCL56293.1 | SCL56306.1 | GA0070608_1629 | GA0070608_1631 | DNA helicase IV. | ABC-2 type transport system permease protein. | 0.601 |
SCL56300.1 | SCL45538.1 | GA0070608_1630 | GA0070608_0015 | ABC-2 type transport system ATP-binding protein. | Nucleotidyl transferase AbiEii toxin, Type IV TA system. | 0.405 |
SCL56300.1 | SCL56293.1 | GA0070608_1630 | GA0070608_1629 | ABC-2 type transport system ATP-binding protein. | DNA helicase IV. | 0.608 |
SCL56300.1 | SCL56306.1 | GA0070608_1630 | GA0070608_1631 | ABC-2 type transport system ATP-binding protein. | ABC-2 type transport system permease protein. | 0.938 |
SCL56300.1 | SCL69599.1 | GA0070608_1630 | GA0070608_4063 | ABC-2 type transport system ATP-binding protein. | ABC-2 type transport system permease protein. | 0.410 |
SCL56300.1 | SCL72420.1 | GA0070608_1630 | GA0070608_4994 | ABC-2 type transport system ATP-binding protein. | Nucleotidyl transferase AbiEii toxin, Type IV TA system. | 0.427 |
SCL56306.1 | SCL45538.1 | GA0070608_1631 | GA0070608_0015 | ABC-2 type transport system permease protein. | Nucleotidyl transferase AbiEii toxin, Type IV TA system. | 0.601 |
SCL56306.1 | SCL51074.1 | GA0070608_1631 | GA0070608_0799 | ABC-2 type transport system permease protein. | Glycosyltransferase involved in cell wall bisynthesis. | 0.706 |
SCL56306.1 | SCL55303.1 | GA0070608_1631 | GA0070608_1470 | ABC-2 type transport system permease protein. | ABC-2 type transport system ATP-binding protein. | 0.982 |
SCL56306.1 | SCL56293.1 | GA0070608_1631 | GA0070608_1629 | ABC-2 type transport system permease protein. | DNA helicase IV. | 0.601 |
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