STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL56503.1Anti-anti-sigma factor; Manually curated; Belongs to the anti-sigma-factor antagonist family. (111 aa)    
Predicted Functional Partners:
SCL71324.1
PAS/PAC sensor hybrid histidine kinase.
  
 0.996
SCL56521.1
Serine phosphatase RsbU, regulator of sigma subunit.
 
 0.993
SCL72198.1
GAF domain-containing protein.
 
 0.988
SCL56596.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
  
 0.985
SCL55888.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
 
   0.927
SCL48991.1
Signal transduction histidine kinase.
  
 0.923
SCL71880.1
Signal transduction histidine kinase.
  
 0.843
SCL64588.1
Serine/threonine-protein kinase RsbW.
  
 
 0.757
SCL73916.1
PAS fold-containing protein.
 
 0.706
SCL57722.1
Stage II sporulation protein E (SpoIIE).
  
   0.704
Your Current Organism:
Micromonospora peucetia
NCBI taxonomy Id: 47871
Other names: DSM 43363, JCM 12820, M. peucetia, Micromonospora peucetia Kroppenstedt et al. 2005, Micromonospora peucetica, NBRC 101886
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.