Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCL50035.1 | SCL65041.1 | GA0070608_0626 | GA0070608_3051 | PemK-like, MazF-like toxin of type II toxin-antitoxin system. | Transcriptional regulator, HxlR family. | 0.414 |
SCL50035.1 | SCL72509.1 | GA0070608_0626 | GA0070608_5040 | PemK-like, MazF-like toxin of type II toxin-antitoxin system. | Transcriptional regulator, HxlR family. | 0.414 |
SCL50035.1 | SCL73815.1 | GA0070608_0626 | GA0070608_6131 | PemK-like, MazF-like toxin of type II toxin-antitoxin system. | Transcriptional regulator, HxlR family. | 0.414 |
SCL65035.1 | SCL65041.1 | GA0070608_3050 | GA0070608_3051 | Uncharacterized membrane protein YccF, DUF307 family. | Transcriptional regulator, HxlR family. | 0.469 |
SCL65041.1 | SCL50035.1 | GA0070608_3051 | GA0070608_0626 | Transcriptional regulator, HxlR family. | PemK-like, MazF-like toxin of type II toxin-antitoxin system. | 0.414 |
SCL65041.1 | SCL65035.1 | GA0070608_3051 | GA0070608_3050 | Transcriptional regulator, HxlR family. | Uncharacterized membrane protein YccF, DUF307 family. | 0.469 |
SCL65041.1 | SCL65049.1 | GA0070608_3051 | GA0070608_3052 | Transcriptional regulator, HxlR family. | Hypothetical protein. | 0.515 |
SCL65041.1 | SCL65055.1 | GA0070608_3051 | GA0070608_3053 | Transcriptional regulator, HxlR family. | DNA ligase D. | 0.452 |
SCL65041.1 | SCL72509.1 | GA0070608_3051 | GA0070608_5040 | Transcriptional regulator, HxlR family. | Transcriptional regulator, HxlR family. | 0.774 |
SCL65041.1 | SCL73247.1 | GA0070608_3051 | GA0070608_5496 | Transcriptional regulator, HxlR family. | PemK-like, MazF-like toxin of type II toxin-antitoxin system. | 0.597 |
SCL65041.1 | SCL73815.1 | GA0070608_3051 | GA0070608_6131 | Transcriptional regulator, HxlR family. | Transcriptional regulator, HxlR family. | 0.641 |
SCL65049.1 | SCL65041.1 | GA0070608_3052 | GA0070608_3051 | Hypothetical protein. | Transcriptional regulator, HxlR family. | 0.515 |
SCL65049.1 | SCL65055.1 | GA0070608_3052 | GA0070608_3053 | Hypothetical protein. | DNA ligase D. | 0.668 |
SCL65055.1 | SCL65041.1 | GA0070608_3053 | GA0070608_3051 | DNA ligase D. | Transcriptional regulator, HxlR family. | 0.452 |
SCL65055.1 | SCL65049.1 | GA0070608_3053 | GA0070608_3052 | DNA ligase D. | Hypothetical protein. | 0.668 |
SCL72509.1 | SCL50035.1 | GA0070608_5040 | GA0070608_0626 | Transcriptional regulator, HxlR family. | PemK-like, MazF-like toxin of type II toxin-antitoxin system. | 0.414 |
SCL72509.1 | SCL65041.1 | GA0070608_5040 | GA0070608_3051 | Transcriptional regulator, HxlR family. | Transcriptional regulator, HxlR family. | 0.774 |
SCL72509.1 | SCL73247.1 | GA0070608_5040 | GA0070608_5496 | Transcriptional regulator, HxlR family. | PemK-like, MazF-like toxin of type II toxin-antitoxin system. | 0.597 |
SCL72509.1 | SCL73815.1 | GA0070608_5040 | GA0070608_6131 | Transcriptional regulator, HxlR family. | Transcriptional regulator, HxlR family. | 0.695 |
SCL73247.1 | SCL65041.1 | GA0070608_5496 | GA0070608_3051 | PemK-like, MazF-like toxin of type II toxin-antitoxin system. | Transcriptional regulator, HxlR family. | 0.597 |
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