STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL66112.1ABC-2 type transport system ATP-binding protein. (272 aa)    
Predicted Functional Partners:
SCL66105.1
ABC-2 type transport system permease protein.
  
 0.960
SCL73888.1
ABC-2 type transport system permease protein.
 
 0.848
SCL72499.1
ABC transporter efflux protein, DrrB family.
 
 0.843
SCL51504.1
ABC-2 type transport system permease protein.
 
  
  0.836
SCL53164.1
ABC-2 type transport system permease protein.
 
    0.751
SCL73586.1
ABC-type sugar transport system, ATPase component.
    
 
0.665
atpD
F-type H+-transporting ATPase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
   0.564
atpA
ATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
   0.550
SCL66117.1
Putative adhesin.
  
    0.466
SCL50164.1
ABC-type transport system involved in multi-copper enzyme maturation, permease component.
   
   0.448
Your Current Organism:
Micromonospora peucetia
NCBI taxonomy Id: 47871
Other names: DSM 43363, JCM 12820, M. peucetia, Micromonospora peucetia Kroppenstedt et al. 2005, Micromonospora peucetica, NBRC 101886
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.