STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL71690.1Linear amide C-N hydrolases, choloylglycine hydrolase family. (332 aa)    
Predicted Functional Partners:
SCL73399.1
Hypothetical protein.
  
     0.551
SCL71693.1
Hypothetical protein (DUF2188).
       0.542
SCL58140.1
Hypothetical protein.
  
     0.467
SCL69144.1
Terpene synthase family, metal binding domain.
  
     0.463
SCL62729.1
Hypothetical protein.
  
     0.456
SCL71853.1
Activator of Hsp90 ATPase homolog 1-like protein.
  
     0.454
SCL71811.1
D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family.
  
  
  0.421
SCL52965.1
Hypothetical protein.
  
     0.419
SCL54774.1
Lantibiotic dehydratase, C terminus.
  
     0.417
Your Current Organism:
Micromonospora peucetia
NCBI taxonomy Id: 47871
Other names: DSM 43363, JCM 12820, M. peucetia, Micromonospora peucetia Kroppenstedt et al. 2005, Micromonospora peucetica, NBRC 101886
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.