STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL72166.1Hypothetical protein. (295 aa)    
Predicted Functional Partners:
SCL72163.1
Transcriptional regulator, GntR family.
 
     0.845
SCL70513.1
5-dehydro-2-deoxygluconokinase.
 
 
  0.820
SCL70520.1
5-deoxyglucuronate isomerase; Manually curated.
 
    0.814
SCL72140.1
2-keto-myo-inositol dehydratase.
 
     0.767
SCL70523.1
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing); Belongs to the TPP enzyme family.
 
    0.766
SCL70503.1
Transcriptional regulator, GntR family.
 
     0.760
SCL54364.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
     
 0.751
SCL70510.1
2-keto-myo-inositol dehydratase.
 
     0.740
SCL67478.1
2-oxoisovalerate dehydrogenase E1 component.
  
 
 0.735
SCL57591.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
  
 
  0.670
Your Current Organism:
Micromonospora peucetia
NCBI taxonomy Id: 47871
Other names: DSM 43363, JCM 12820, M. peucetia, Micromonospora peucetia Kroppenstedt et al. 2005, Micromonospora peucetica, NBRC 101886
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.