STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL72980.1Protein of unknown function (DUF4157). (2510 aa)    
Predicted Functional Partners:
SCL72968.1
Conserved hypothetical phage tail region protein.
       0.773
SCL72970.1
Hypothetical protein.
       0.773
SCL72972.1
Hypothetical protein.
       0.773
SCL72973.1
Protein of unknown function (DUF4255).
       0.773
SCL72976.1
ATPase family associated with various cellular activities (AAA).
       0.773
SCL72978.1
Hypothetical protein.
       0.773
SCL72982.1
Hypothetical protein.
       0.773
SCL72984.1
Hypothetical protein.
       0.773
SCL72986.1
Hypothetical protein.
       0.773
SCL72988.1
Phage-related baseplate assembly protein.
       0.773
Your Current Organism:
Micromonospora peucetia
NCBI taxonomy Id: 47871
Other names: DSM 43363, JCM 12820, M. peucetia, Micromonospora peucetia Kroppenstedt et al. 2005, Micromonospora peucetica, NBRC 101886
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.