STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000526255_00024Unannotated protein. (195 aa)    
Predicted Functional Partners:
GCA_000526255_00220
Unannotated protein.
    
 0.894
GCA_000526255_00207
Unannotated protein.
  
 
 0.813
GCA_000526255_00025
Unannotated protein.
       0.718
GCA_000526255_01721
Unannotated protein.
  
 
 0.690
GCA_000526255_01385
Unannotated protein.
  
    0.667
GCA_000526255_02176
Unannotated protein.
   
 0.612
GCA_000526255_01414
Unannotated protein.
 
  
  0.546
GCA_000526255_00026
Unannotated protein.
       0.539
GCA_000526255_01585
Unannotated protein.
    
 0.488
GCA_000526255_01525
Unannotated protein.
  
  
 0.476
Your Current Organism:
Verrucomicrobia bacterium LP2A
NCBI taxonomy Id: 478741
Other names: V. bacterium LP2A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.