Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SEP55946.1 | SEP55960.1 | SAMN05444359_10114 | SAMN05444359_10115 | Putative redox protein. | Hypothetical protein. | 0.448 |
| SEP55946.1 | SEP55975.1 | SAMN05444359_10114 | SAMN05444359_10116 | Putative redox protein. | Hypothetical protein. | 0.448 |
| SEP55946.1 | SEP75631.1 | SAMN05444359_10114 | SAMN05444359_10285 | Putative redox protein. | Pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component. | 0.705 |
| SEP55946.1 | SEP75860.1 | SAMN05444359_10114 | SAMN05444359_10292 | Putative redox protein. | 2-oxoisovalerate dehydrogenase E1 component. | 0.705 |
| SEP55946.1 | sucC | SAMN05444359_10114 | SAMN05444359_101346 | Putative redox protein. | succinyl-CoA synthetase beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.456 |
| SEP55946.1 | sucD | SAMN05444359_10114 | SAMN05444359_10635 | Putative redox protein. | succinyl-CoA synthetase alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.459 |
| SEP55960.1 | SEP55946.1 | SAMN05444359_10115 | SAMN05444359_10114 | Hypothetical protein. | Putative redox protein. | 0.448 |
| SEP55960.1 | SEP55975.1 | SAMN05444359_10115 | SAMN05444359_10116 | Hypothetical protein. | Hypothetical protein. | 0.773 |
| SEP55975.1 | SEP55946.1 | SAMN05444359_10116 | SAMN05444359_10114 | Hypothetical protein. | Putative redox protein. | 0.448 |
| SEP55975.1 | SEP55960.1 | SAMN05444359_10116 | SAMN05444359_10115 | Hypothetical protein. | Hypothetical protein. | 0.773 |
| SEP75631.1 | SEP55946.1 | SAMN05444359_10285 | SAMN05444359_10114 | Pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component. | Putative redox protein. | 0.705 |
| SEP75631.1 | SEP75860.1 | SAMN05444359_10285 | SAMN05444359_10292 | Pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component. | 2-oxoisovalerate dehydrogenase E1 component. | 0.999 |
| SEP75631.1 | sucC | SAMN05444359_10285 | SAMN05444359_101346 | Pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component. | succinyl-CoA synthetase beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.682 |
| SEP75631.1 | sucD | SAMN05444359_10285 | SAMN05444359_10635 | Pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component. | succinyl-CoA synthetase alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.456 |
| SEP75860.1 | SEP55946.1 | SAMN05444359_10292 | SAMN05444359_10114 | 2-oxoisovalerate dehydrogenase E1 component. | Putative redox protein. | 0.705 |
| SEP75860.1 | SEP75631.1 | SAMN05444359_10292 | SAMN05444359_10285 | 2-oxoisovalerate dehydrogenase E1 component. | Pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component. | 0.999 |
| SEP75860.1 | sucC | SAMN05444359_10292 | SAMN05444359_101346 | 2-oxoisovalerate dehydrogenase E1 component. | succinyl-CoA synthetase beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.682 |
| SEP75860.1 | sucD | SAMN05444359_10292 | SAMN05444359_10635 | 2-oxoisovalerate dehydrogenase E1 component. | succinyl-CoA synthetase alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.456 |
| sucC | SEP55946.1 | SAMN05444359_101346 | SAMN05444359_10114 | succinyl-CoA synthetase beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | Putative redox protein. | 0.456 |
| sucC | SEP75631.1 | SAMN05444359_101346 | SAMN05444359_10285 | succinyl-CoA synthetase beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | Pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component. | 0.682 |
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