Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEP61353.1 | SEP61382.1 | SAMN05444359_101241 | SAMN05444359_101242 | Hypothetical protein. | Hypothetical protein; Belongs to the LOG family. | 0.491 |
SEP61382.1 | SEP61353.1 | SAMN05444359_101242 | SAMN05444359_101241 | Hypothetical protein; Belongs to the LOG family. | Hypothetical protein. | 0.491 |
SEP61382.1 | SEP61393.1 | SAMN05444359_101242 | SAMN05444359_101243 | Hypothetical protein; Belongs to the LOG family. | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. | 0.446 |
SEP61382.1 | SEQ30856.1 | SAMN05444359_101242 | SAMN05444359_10821 | Hypothetical protein; Belongs to the LOG family. | Membrane-bound lytic murein transglycosylase D. | 0.449 |
SEP61382.1 | SEQ54222.1 | SAMN05444359_101242 | SAMN05444359_111129 | Hypothetical protein; Belongs to the LOG family. | Cytosine/adenosine deaminase. | 0.406 |
SEP61382.1 | tadA | SAMN05444359_101242 | SAMN05444359_1287 | Hypothetical protein; Belongs to the LOG family. | tRNA(adenine34) deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | 0.405 |
SEP61393.1 | SEP61382.1 | SAMN05444359_101243 | SAMN05444359_101242 | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. | Hypothetical protein; Belongs to the LOG family. | 0.446 |
SEQ30856.1 | SEP61382.1 | SAMN05444359_10821 | SAMN05444359_101242 | Membrane-bound lytic murein transglycosylase D. | Hypothetical protein; Belongs to the LOG family. | 0.449 |
SEQ54222.1 | SEP61382.1 | SAMN05444359_111129 | SAMN05444359_101242 | Cytosine/adenosine deaminase. | Hypothetical protein; Belongs to the LOG family. | 0.406 |
SEQ54222.1 | tadA | SAMN05444359_111129 | SAMN05444359_1287 | Cytosine/adenosine deaminase. | tRNA(adenine34) deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | 0.650 |
tadA | SEP61382.1 | SAMN05444359_1287 | SAMN05444359_101242 | tRNA(adenine34) deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | Hypothetical protein; Belongs to the LOG family. | 0.405 |
tadA | SEQ54222.1 | SAMN05444359_1287 | SAMN05444359_111129 | tRNA(adenine34) deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | Cytosine/adenosine deaminase. | 0.650 |