STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP67121.1Type I restriction enzyme M protein. (514 aa)    
Predicted Functional Partners:
SEP67300.1
Type I restriction enzyme, R subunit; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
 0.989
SEP67158.1
Type I restriction enzyme, S subunit.
 
 0.984
SEQ60377.1
Type I restriction enzyme, S subunit.
 
 0.880
SER19009.1
Type I restriction enzyme, S subunit.
  
 
 0.834
SEQ60460.1
Type I restriction enzyme, R subunit.
  
 
 0.790
SER30291.1
ADP-ribosylglycohydrolase.
 
      0.761
SEP67048.1
TRAP transporter, DctM subunit.
       0.531
SEP67084.1
TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
       0.531
SEQ58092.1
Uncharacterized conserved protein.
  
    0.511
SEP56307.1
Type I restriction enzyme R protein N terminus (HSDR_N).
  
 
 0.429
Your Current Organism:
Lewinella agarilytica
NCBI taxonomy Id: 478744
Other names: DSM 24740, JBRI 2009, JCM 14216, KCTC 12774, L. agarilytica, Lewinella agarilytica Lee 2007, strain SST-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.