STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ01240.1Hypothetical protein. (227 aa)    
Predicted Functional Partners:
SEQ01416.1
Alkylhydroperoxidase/carboxymuconolactone decarboxylase family protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
 
     0.780
SEQ01453.1
Radical SAM/Cys-rich domain-containing protein.
 
     0.774
SEQ76483.1
Transferase 2, rSAM/selenodomain-associated.
  
     0.770
SER11393.1
Glycosyl transferase family 2.
  
     0.770
SEQ01270.1
TonB-linked outer membrane protein, SusC/RagA family.
 
     0.732
SER41220.1
Protein of unknown function, DUF547.
 
     0.696
SEQ75152.1
Protein of unknown function.
  
     0.686
SER42812.1
Protein of unknown function, DUF547.
 
     0.684
SEQ01341.1
Sodium:solute symporter family protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.678
SEQ01307.1
Starch-binding associating with outer membrane.
 
     0.650
Your Current Organism:
Lewinella agarilytica
NCBI taxonomy Id: 478744
Other names: DSM 24740, JBRI 2009, JCM 14216, KCTC 12774, L. agarilytica, Lewinella agarilytica Lee 2007, strain SST-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.