STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP96226.1Flagellum-specific peptidoglycan hydrolase FlgJ. (283 aa)    
Predicted Functional Partners:
SEQ82856.1
Protein of unknown function.
  
     0.754
SER13191.1
Activator of Hsp90 ATPase homolog 1-like protein.
  
     0.690
SEQ90297.1
Protein of unknown function.
  
     0.643
SEP98910.1
GldM C-terminal domain-containing protein.
  
     0.642
SEQ19966.1
Gliding motility associated protien GldN.
  
     0.642
SER40244.1
Gliding motility-associated protein GldM.
  
     0.634
SER40220.1
Protein involved in gliding motility GldN.
  
     0.601
SER27055.1
tRNA A37 threonylcarbamoyladenosine synthetase subunit TsaC/SUA5/YrdC; Belongs to the SUA5 family.
  
     0.600
SEQ64233.1
Putative porin.
  
     0.596
SEP85090.1
Hypothetical protein.
  
     0.580
Your Current Organism:
Lewinella agarilytica
NCBI taxonomy Id: 478744
Other names: DSM 24740, JBRI 2009, JCM 14216, KCTC 12774, L. agarilytica, Lewinella agarilytica Lee 2007, strain SST-19
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