STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ09516.1Hypothetical protein. (871 aa)    
Predicted Functional Partners:
SEQ09551.1
Beta-glucosidase.
    
  0.788
SEQ82202.1
Por secretion system C-terminal sorting domain-containing protein.
    
 0.637
SEQ09427.1
Arylsulfatase A.
       0.580
SEQ09453.1
alpha-L-rhamnosidase.
       0.580
SEQ09485.1
Arylsulfatase A.
       0.580
SEQ09606.1
Glycosyl hydrolases family 2, sugar binding domain; Belongs to the glycosyl hydrolase 2 family.
    
  0.556
SEQ09641.1
alpha-L-rhamnosidase.
    
  0.556
SEQ09576.1
Hypothetical protein.
       0.547
SEQ09672.1
Por secretion system C-terminal sorting domain-containing protein.
       0.492
SEQ09394.1
L-rhamnose mutarotase; Involved in the anomeric conversion of L-rhamnose.
       0.476
Your Current Organism:
Lewinella agarilytica
NCBI taxonomy Id: 478744
Other names: DSM 24740, JBRI 2009, JCM 14216, KCTC 12774, L. agarilytica, Lewinella agarilytica Lee 2007, strain SST-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.