STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ05566.1Multidrug resistance efflux pump. (334 aa)    
Predicted Functional Partners:
SEQ05593.1
Hypothetical protein.
  
  0.818
SEQ05531.1
Protein of unknown function.
       0.774
SEQ57128.1
Cobalt-zinc-cadmium resistance protein CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.530
SEQ90112.1
Cobalt-zinc-cadmium resistance protein CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.530
SEP89553.1
Chitobiase/beta-hexosaminidase C-terminal domain-containing protein.
  
  0.485
SEP58555.1
ABC-type bacteriocin/lantibiotic exporter, contains an N-terminal double-glycine peptidase domain.
   
  0.483
SEP74825.1
Bacteriocin-processing peptidase. Cysteine peptidase. MEROPS family C39.
   
  0.483
SEP89703.1
ATP-binding cassette, subfamily B.
   
  0.483
SEQ05641.1
Colicin V processing peptidase. Cysteine peptidase. MEROPS family C39 /alpha-hemolysin translocation ATP-binding protein HlyB.
   
  0.483
SEQ42083.1
ATP-binding cassette, subfamily B.
   
  0.483
Your Current Organism:
Lewinella agarilytica
NCBI taxonomy Id: 478744
Other names: DSM 24740, JBRI 2009, JCM 14216, KCTC 12774, L. agarilytica, Lewinella agarilytica Lee 2007, strain SST-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.