Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEP56213.1 | SEQ24583.1 | SAMN05444359_10133 | SAMN05444359_10764 | Glutamate synthase (NADH) large subunit. | ABC-type sugar transport system, substrate-binding protein, contains N-terminal xre family HTH domain. | 0.870 |
SEP56213.1 | SEQ41565.1 | SAMN05444359_10133 | SAMN05444359_109107 | Glutamate synthase (NADH) large subunit. | AraC-type DNA-binding protein. | 0.764 |
SEP56213.1 | SEQ92778.1 | SAMN05444359_10133 | SAMN05444359_11935 | Glutamate synthase (NADH) large subunit. | AraC-type DNA-binding protein. | 0.764 |
SEQ24583.1 | SEP56213.1 | SAMN05444359_10764 | SAMN05444359_10133 | ABC-type sugar transport system, substrate-binding protein, contains N-terminal xre family HTH domain. | Glutamate synthase (NADH) large subunit. | 0.870 |
SEQ24583.1 | SEQ41565.1 | SAMN05444359_10764 | SAMN05444359_109107 | ABC-type sugar transport system, substrate-binding protein, contains N-terminal xre family HTH domain. | AraC-type DNA-binding protein. | 0.521 |
SEQ24583.1 | SEQ92778.1 | SAMN05444359_10764 | SAMN05444359_11935 | ABC-type sugar transport system, substrate-binding protein, contains N-terminal xre family HTH domain. | AraC-type DNA-binding protein. | 0.407 |
SEQ41565.1 | SEP56213.1 | SAMN05444359_109107 | SAMN05444359_10133 | AraC-type DNA-binding protein. | Glutamate synthase (NADH) large subunit. | 0.764 |
SEQ41565.1 | SEQ24583.1 | SAMN05444359_109107 | SAMN05444359_10764 | AraC-type DNA-binding protein. | ABC-type sugar transport system, substrate-binding protein, contains N-terminal xre family HTH domain. | 0.521 |
SEQ41565.1 | SEQ92778.1 | SAMN05444359_109107 | SAMN05444359_11935 | AraC-type DNA-binding protein. | AraC-type DNA-binding protein. | 0.497 |
SEQ92778.1 | SEP56213.1 | SAMN05444359_11935 | SAMN05444359_10133 | AraC-type DNA-binding protein. | Glutamate synthase (NADH) large subunit. | 0.764 |
SEQ92778.1 | SEQ24583.1 | SAMN05444359_11935 | SAMN05444359_10764 | AraC-type DNA-binding protein. | ABC-type sugar transport system, substrate-binding protein, contains N-terminal xre family HTH domain. | 0.407 |
SEQ92778.1 | SEQ41565.1 | SAMN05444359_11935 | SAMN05444359_109107 | AraC-type DNA-binding protein. | AraC-type DNA-binding protein. | 0.497 |