STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ54514.1Two component transcriptional regulator, LytTR family. (255 aa)    
Predicted Functional Partners:
SEQ54545.1
Two-component sensor histidine kinase, contains HisKA and HATPase domains.
     0.946
SEQ50990.1
Two-component sensor histidine kinase, contains HisKA and HATPase domains.
 
     0.773
SER36939.1
Two-component sensor histidine kinase, contains HisKA and HATPase domains.
 
     0.773
SEP96927.1
Two-component sensor histidine kinase, contains HisKA and HATPase domains.
 
     0.772
SEQ39585.1
Two-component sensor histidine kinase, contains HisKA and HATPase domains.
  
  
  0.772
SEP63201.1
Two-component sensor histidine kinase, contains HisKA and HATPase domains.
 
     0.770
SEQ24583.1
ABC-type sugar transport system, substrate-binding protein, contains N-terminal xre family HTH domain.
  
  
 0.658
SEQ26657.1
Signal transduction histidine kinase.
  
  
  0.655
SEQ61649.1
Two component regulator propeller.
  
  
 0.630
SEQ54589.1
LytTr DNA-binding domain-containing protein.
 
    
0.568
Your Current Organism:
Lewinella agarilytica
NCBI taxonomy Id: 478744
Other names: DSM 24740, JBRI 2009, JCM 14216, KCTC 12774, L. agarilytica, Lewinella agarilytica Lee 2007, strain SST-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.