STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ81729.1phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein. (257 aa)    
Predicted Functional Partners:
SEQ81693.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
 
 0.999
SEQ94039.1
Anti-anti-sigma factor.
   
  0.977
SEP66956.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
 
 0.971
SEQ41851.1
MlaD protein.
  
 0.933
SEQ71388.1
Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
 
    0.842
SEP80044.1
ABC-type multidrug transport system, ATPase component.
 
  
  0.832
cysS
cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
     0.667
SEQ70319.1
Nitrate/nitrite transport system substrate-binding protein.
 
      0.632
rpsE
SSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
  
     0.594
SEQ52814.1
Putative ABC transport system permease protein.
 
      0.583
Your Current Organism:
Lewinella agarilytica
NCBI taxonomy Id: 478744
Other names: DSM 24740, JBRI 2009, JCM 14216, KCTC 12774, L. agarilytica, Lewinella agarilytica Lee 2007, strain SST-19
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