Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEQ38371.1 | SEQ86001.1 | SAMN05444359_10910 | SAMN05444359_11761 | Conserved hypothetical protein. | Predicted nucleotidyltransferase. | 0.533 |
SEQ38371.1 | SEQ86020.1 | SAMN05444359_10910 | SAMN05444359_11762 | Conserved hypothetical protein. | Hypothetical protein. | 0.472 |
SEQ38371.1 | SER40425.1 | SAMN05444359_10910 | SAMN05444359_14031 | Conserved hypothetical protein. | TROVE domain-containing protein. | 0.410 |
SEQ38371.1 | kptA | SAMN05444359_10910 | SAMN05444359_12471 | Conserved hypothetical protein. | Putative RNA 2'-phosphotransferase; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase. | 0.419 |
SEQ86001.1 | SEQ38371.1 | SAMN05444359_11761 | SAMN05444359_10910 | Predicted nucleotidyltransferase. | Conserved hypothetical protein. | 0.533 |
SEQ86001.1 | SEQ86020.1 | SAMN05444359_11761 | SAMN05444359_11762 | Predicted nucleotidyltransferase. | Hypothetical protein. | 0.947 |
SEQ86001.1 | SER18843.1 | SAMN05444359_11761 | SAMN05444359_12720 | Predicted nucleotidyltransferase. | tRNA-splicing ligase RtcB. | 0.426 |
SEQ86001.1 | SER30315.1 | SAMN05444359_11761 | SAMN05444359_13334 | Predicted nucleotidyltransferase. | ADP-ribosylglycohydrolase. | 0.556 |
SEQ86001.1 | SER40425.1 | SAMN05444359_11761 | SAMN05444359_14031 | Predicted nucleotidyltransferase. | TROVE domain-containing protein. | 0.616 |
SEQ86001.1 | kptA | SAMN05444359_11761 | SAMN05444359_12471 | Predicted nucleotidyltransferase. | Putative RNA 2'-phosphotransferase; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase. | 0.459 |
SEQ86020.1 | SEQ38371.1 | SAMN05444359_11762 | SAMN05444359_10910 | Hypothetical protein. | Conserved hypothetical protein. | 0.472 |
SEQ86020.1 | SEQ86001.1 | SAMN05444359_11762 | SAMN05444359_11761 | Hypothetical protein. | Predicted nucleotidyltransferase. | 0.947 |
SEQ86020.1 | SEQ86045.1 | SAMN05444359_11762 | SAMN05444359_11763 | Hypothetical protein. | Hypothetical protein. | 0.536 |
SEQ86020.1 | SER18843.1 | SAMN05444359_11762 | SAMN05444359_12720 | Hypothetical protein. | tRNA-splicing ligase RtcB. | 0.518 |
SEQ86020.1 | SER30315.1 | SAMN05444359_11762 | SAMN05444359_13334 | Hypothetical protein. | ADP-ribosylglycohydrolase. | 0.420 |
SEQ86020.1 | SER40425.1 | SAMN05444359_11762 | SAMN05444359_14031 | Hypothetical protein. | TROVE domain-containing protein. | 0.591 |
SEQ86020.1 | kptA | SAMN05444359_11762 | SAMN05444359_12471 | Hypothetical protein. | Putative RNA 2'-phosphotransferase; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase. | 0.587 |
SEQ86045.1 | SEQ86020.1 | SAMN05444359_11763 | SAMN05444359_11762 | Hypothetical protein. | Hypothetical protein. | 0.536 |
SER18843.1 | SEQ86001.1 | SAMN05444359_12720 | SAMN05444359_11761 | tRNA-splicing ligase RtcB. | Predicted nucleotidyltransferase. | 0.426 |
SER18843.1 | SEQ86020.1 | SAMN05444359_12720 | SAMN05444359_11762 | tRNA-splicing ligase RtcB. | Hypothetical protein. | 0.518 |
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