STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ89341.1Fibronectin type III domain-containing protein. (465 aa)    
Predicted Functional Partners:
SER30533.1
Protein of unknown function.
  
     0.622
SER05318.1
Broad specificity phosphatase PhoE.
  
    0.589
SEQ93849.1
Para-nitrobenzyl esterase; Belongs to the type-B carboxylesterase/lipase family.
  
 0.554
SEP74281.1
Zinc carboxypeptidase.
  
     0.450
SER00477.1
Zinc carboxypeptidase.
  
     0.434
SEP98800.1
Zinc carboxypeptidase.
  
     0.428
SEQ40084.1
Imidazolonepropionase.
  
     0.416
SEQ30268.1
Peptidase family M1.
  
 
  0.411
SEP59016.1
Uridine kinase.
  
 
  0.409
SEP57472.1
Protein of unknown function.
  
     0.409
Your Current Organism:
Lewinella agarilytica
NCBI taxonomy Id: 478744
Other names: DSM 24740, JBRI 2009, JCM 14216, KCTC 12774, L. agarilytica, Lewinella agarilytica Lee 2007, strain SST-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.