STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ90792.1Hypothetical protein. (389 aa)    
Predicted Functional Partners:
SER43650.1
Putative membrane protein.
  
     0.592
SER25250.1
Protein of unknown function.
   
    0.554
SEP58703.1
Protein of unknown function.
  
     0.549
SEP90231.1
Alkaline phosphatase; Belongs to the alkaline phosphatase family.
  
  
 0.542
SEQ90765.1
Cystathionine beta-synthase.
  
  
 0.495
SEQ92463.1
Azurin.
  
 
 
 0.475
SEP87033.1
D-alanine-D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
  
   
 0.470
SEQ24583.1
ABC-type sugar transport system, substrate-binding protein, contains N-terminal xre family HTH domain.
  
  
 0.470
pheT
phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
  
  
 0.455
SER04221.1
AhpC/TSA family protein.
  
     0.437
Your Current Organism:
Lewinella agarilytica
NCBI taxonomy Id: 478744
Other names: DSM 24740, JBRI 2009, JCM 14216, KCTC 12774, L. agarilytica, Lewinella agarilytica Lee 2007, strain SST-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.