STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ93462.1Sulfite dehydrogenase (cytochrome) subunit SorA apoprotein. (438 aa)    
Predicted Functional Partners:
SEQ93491.1
Hypothetical protein.
 
   
 0.955
SER13048.1
Hypothetical protein.
  
 0.947
SEQ66087.1
Complex I intermediate-associated protein 30 (CIA30).
   
 0.942
SER43886.1
Glyoxylase, beta-lactamase superfamily II.
 
 
 
 0.861
SER43520.1
Glyoxylase, beta-lactamase superfamily II.
 
 
 
 0.851
SEQ31346.1
Glyoxylase, beta-lactamase superfamily II.
 
 
 
 0.848
SEP68508.1
Prokaryotic molybdopterin-containing oxidoreductase family, iron-sulfur binding subunit.
    
 0.845
SEQ64736.1
Quinoprotein glucose dehydrogenase.
    
 0.817
SEQ93810.1
Sulfoxide reductase heme-binding subunit YedZ.
  
  
 0.812
SEQ70369.1
Ferredoxin-nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
    
 0.810
Your Current Organism:
Lewinella agarilytica
NCBI taxonomy Id: 478744
Other names: DSM 24740, JBRI 2009, JCM 14216, KCTC 12774, L. agarilytica, Lewinella agarilytica Lee 2007, strain SST-19
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