STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ95911.1ATP-binding cassette, subfamily C. (552 aa)    
Predicted Functional Partners:
SEP80044.1
ABC-type multidrug transport system, ATPase component.
  
  0.812
macB
Putative ABC transport system ATP-binding protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
    
0.728
SEQ81779.1
Molecular chaperone HscA; Belongs to the heat shock protein 70 family.
  
 
 0.690
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.659
SEP62950.1
AAA+-type ATPase, SpoVK/Ycf46/Vps4 family; Belongs to the AAA ATPase family.
 
 
 0.636
SEQ05875.1
ABC-2 type transport system ATP-binding protein.
 
 
0.601
SEP57552.1
Protein involved in gliding motility GldA.
  
 
0.562
SEP74825.1
Bacteriocin-processing peptidase. Cysteine peptidase. MEROPS family C39.
  
 
 
0.557
SEP89703.1
ATP-binding cassette, subfamily B.
  
 
 
0.557
SEP64802.1
AAA+-type ATPase, SpoVK/Ycf46/Vps4 family.
    
 0.536
Your Current Organism:
Lewinella agarilytica
NCBI taxonomy Id: 478744
Other names: DSM 24740, JBRI 2009, JCM 14216, KCTC 12774, L. agarilytica, Lewinella agarilytica Lee 2007, strain SST-19
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.