Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEP56070.1 | SEP99882.1 | SAMN05444359_10124 | SAMN05444359_104177 | Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain. | Gliding motility-associated lipoprotein GldK/gliding motility-associated lipoprotein GldK,TIGR03529. | 0.759 |
SEP56070.1 | SEQ70605.1 | SAMN05444359_10124 | SAMN05444359_11476 | Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain. | Sulfatase-modifying factor enzyme 1. | 0.707 |
SEP56070.1 | SEQ99679.1 | SAMN05444359_10124 | SAMN05444359_1218 | Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain. | Arylsulfatase A. | 0.620 |
SEP56070.1 | SEQ99825.1 | SAMN05444359_10124 | SAMN05444359_12113 | Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain. | Arylsulfatase A. | 0.774 |
SEP99882.1 | SEP56070.1 | SAMN05444359_104177 | SAMN05444359_10124 | Gliding motility-associated lipoprotein GldK/gliding motility-associated lipoprotein GldK,TIGR03529. | Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain. | 0.759 |
SEP99882.1 | SEQ99679.1 | SAMN05444359_104177 | SAMN05444359_1218 | Gliding motility-associated lipoprotein GldK/gliding motility-associated lipoprotein GldK,TIGR03529. | Arylsulfatase A. | 0.424 |
SEP99882.1 | SEQ99825.1 | SAMN05444359_104177 | SAMN05444359_12113 | Gliding motility-associated lipoprotein GldK/gliding motility-associated lipoprotein GldK,TIGR03529. | Arylsulfatase A. | 0.458 |
SEQ70605.1 | SEP56070.1 | SAMN05444359_11476 | SAMN05444359_10124 | Sulfatase-modifying factor enzyme 1. | Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain. | 0.707 |
SEQ70605.1 | SEQ99679.1 | SAMN05444359_11476 | SAMN05444359_1218 | Sulfatase-modifying factor enzyme 1. | Arylsulfatase A. | 0.463 |
SEQ70605.1 | SEQ99825.1 | SAMN05444359_11476 | SAMN05444359_12113 | Sulfatase-modifying factor enzyme 1. | Arylsulfatase A. | 0.503 |
SEQ99679.1 | SEP56070.1 | SAMN05444359_1218 | SAMN05444359_10124 | Arylsulfatase A. | Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain. | 0.620 |
SEQ99679.1 | SEP99882.1 | SAMN05444359_1218 | SAMN05444359_104177 | Arylsulfatase A. | Gliding motility-associated lipoprotein GldK/gliding motility-associated lipoprotein GldK,TIGR03529. | 0.424 |
SEQ99679.1 | SEQ70605.1 | SAMN05444359_1218 | SAMN05444359_11476 | Arylsulfatase A. | Sulfatase-modifying factor enzyme 1. | 0.463 |
SEQ99679.1 | SEQ99825.1 | SAMN05444359_1218 | SAMN05444359_12113 | Arylsulfatase A. | Arylsulfatase A. | 0.717 |
SEQ99735.1 | SEQ99796.1 | SAMN05444359_12110 | SAMN05444359_12112 | SusD family protein. | Hypothetical protein. | 0.550 |
SEQ99735.1 | SEQ99825.1 | SAMN05444359_12110 | SAMN05444359_12113 | SusD family protein. | Arylsulfatase A. | 0.433 |
SEQ99735.1 | SEQ99885.1 | SAMN05444359_12110 | SAMN05444359_12115 | SusD family protein. | Glycosyl hydrolases family 28; Belongs to the glycosyl hydrolase 28 family. | 0.492 |
SEQ99796.1 | SEQ99735.1 | SAMN05444359_12112 | SAMN05444359_12110 | Hypothetical protein. | SusD family protein. | 0.550 |
SEQ99796.1 | SEQ99825.1 | SAMN05444359_12112 | SAMN05444359_12113 | Hypothetical protein. | Arylsulfatase A. | 0.485 |
SEQ99796.1 | SEQ99852.1 | SAMN05444359_12112 | SAMN05444359_12114 | Hypothetical protein. | Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family. | 0.470 |
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