STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER07227.1Por secretion system C-terminal sorting domain-containing protein. (549 aa)    
Predicted Functional Partners:
SER07204.1
TonB-dependent Receptor Plug Domain.
 
     0.865
SEQ98018.1
Outer membrane protein beta-barrel family protein.
  
     0.748
SEQ98068.1
Hypothetical protein.
  
     0.685
SEQ89984.1
TonB-dependent Receptor Plug Domain.
  
     0.684
SER45250.1
Uncharacterized protein involved in exopolysaccharide biosynthesis.
  
     0.673
SEQ95858.1
Hypothetical protein.
  
     0.670
SER23172.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.669
SER23372.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.650
SEP90954.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.637
SER27075.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.636
Your Current Organism:
Lewinella agarilytica
NCBI taxonomy Id: 478744
Other names: DSM 24740, JBRI 2009, JCM 14216, KCTC 12774, L. agarilytica, Lewinella agarilytica Lee 2007, strain SST-19
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