STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER19036.1Type I restriction enzyme M protein. (477 aa)    
Predicted Functional Partners:
SER19009.1
Type I restriction enzyme, S subunit.
 
 0.986
SER19044.1
Type I restriction enzyme, R subunit.
 
 
 0.934
SER18983.1
AAA domain-containing protein.
 
  
 0.866
SEP67158.1
Type I restriction enzyme, S subunit.
 
 
 0.865
SEQ60377.1
Type I restriction enzyme, S subunit.
 
 
 0.856
SEP67300.1
Type I restriction enzyme, R subunit; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
 
 0.787
SEQ60460.1
Type I restriction enzyme, R subunit.
  
 
 0.787
SEQ58092.1
Uncharacterized conserved protein.
  
    0.495
SEP56307.1
Type I restriction enzyme R protein N terminus (HSDR_N).
  
 
 0.429
SEQ24673.1
Hypothetical protein.
  
 
 0.429
Your Current Organism:
Lewinella agarilytica
NCBI taxonomy Id: 478744
Other names: DSM 24740, JBRI 2009, JCM 14216, KCTC 12774, L. agarilytica, Lewinella agarilytica Lee 2007, strain SST-19
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