STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER20540.1Glycosyltransferase involved in cell wall bisynthesis. (317 aa)    
Predicted Functional Partners:
SER23076.1
Dolichol-phosphate mannosyltransferase.
  
  
  0.750
SER20521.1
Dihydroorotase.
       0.614
SER11445.1
D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase.
  
 0.588
tadA
tRNA(adenine34) deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
    
  0.515
SER23120.1
4-amino-4-deoxy-L-arabinose transferase.
 
 
  0.465
SEP85557.1
Dolichyl-phosphate-mannose-protein mannosyltransferase.
  
 
  0.458
SEQ34837.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.415
Your Current Organism:
Lewinella agarilytica
NCBI taxonomy Id: 478744
Other names: DSM 24740, JBRI 2009, JCM 14216, KCTC 12774, L. agarilytica, Lewinella agarilytica Lee 2007, strain SST-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.