STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER22899.1Electron transfer flavoprotein alpha subunit apoprotein. (318 aa)    
Predicted Functional Partners:
SER22911.1
Electron transfer flavoprotein beta subunit.
 0.999
SEP78637.1
Acyl-CoA dehydrogenase.
 0.997
SEQ96081.1
Acyl-CoA dehydrogenase.
 0.996
SER07858.1
glutaryl-CoA dehydrogenase.
 0.993
SEQ89290.1
2,4-dienoyl-CoA reductase (NADPH2).
   
 
 0.988
SEQ70732.1
Hypothetical protein.
 0.985
SEQ64693.1
butyryl-CoA dehydrogenase.
 0.945
SEQ68868.1
FAD/FMN-containing dehydrogenase.
  
 
 0.928
SEQ97547.1
acyl-CoA dehydrogenase.
 0.928
SEQ33939.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.904
Your Current Organism:
Lewinella agarilytica
NCBI taxonomy Id: 478744
Other names: DSM 24740, JBRI 2009, JCM 14216, KCTC 12774, L. agarilytica, Lewinella agarilytica Lee 2007, strain SST-19
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