STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER23339.1Agarase. (305 aa)    
Predicted Functional Partners:
SEQ99852.1
Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
  
  
  0.786
SEQ06931.1
Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
  
   
 0.775
SER20885.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.769
SEQ90694.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.752
SEP57010.1
Hypothetical protein; Belongs to the cytochrome P450 family.
  
     0.735
SEQ06825.1
L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
  
     0.734
SER43941.1
Glycosyl hydrolases family 2, sugar binding domain; Belongs to the glycosyl hydrolase 2 family.
  
     0.715
SER18526.1
Hypothetical protein.
  
     0.714
SER39943.1
Arylsulfatase A.
  
     0.692
SEQ06747.1
2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
  
     0.691
Your Current Organism:
Lewinella agarilytica
NCBI taxonomy Id: 478744
Other names: DSM 24740, JBRI 2009, JCM 14216, KCTC 12774, L. agarilytica, Lewinella agarilytica Lee 2007, strain SST-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.