STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER28142.1Hypothetical protein. (396 aa)    
Predicted Functional Partners:
SEQ00506.1
Glutathione synthase/RimK-type ligase, ATP-grasp superfamily.
 
  
  0.843
SEQ97858.1
GMP synthase-Glutamine amidotransferase.
 
     0.793
SEQ75788.1
Esterase/lipase superfamily enzyme.
 
     0.786
SEQ85711.1
ATP-grasp domain-containing protein.
 
     0.783
SER07183.1
Enterochelin esterase.
 
     0.783
SEQ33527.1
Predicted hydrolase of the alpha/beta superfamily.
  
     0.747
SER20661.1
Leucyl aminopeptidase; Belongs to the peptidase M17 family.
  
  
  0.683
SER29928.1
CBS domain-containing protein.
    
  0.605
SER28165.1
Undecaprenyl-diphosphatase.
       0.578
SER04784.1
Gamma-glutamyltranspeptidase / glutathione hydrolase.
    
  0.577
Your Current Organism:
Lewinella agarilytica
NCBI taxonomy Id: 478744
Other names: DSM 24740, JBRI 2009, JCM 14216, KCTC 12774, L. agarilytica, Lewinella agarilytica Lee 2007, strain SST-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.