Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEQ86001.1 | SEQ86020.1 | SAMN05444359_11761 | SAMN05444359_11762 | Predicted nucleotidyltransferase. | Hypothetical protein. | 0.947 |
SEQ86001.1 | SER30315.1 | SAMN05444359_11761 | SAMN05444359_13334 | Predicted nucleotidyltransferase. | ADP-ribosylglycohydrolase. | 0.556 |
SEQ86020.1 | SEQ86001.1 | SAMN05444359_11762 | SAMN05444359_11761 | Hypothetical protein. | Predicted nucleotidyltransferase. | 0.947 |
SEQ86020.1 | SER30315.1 | SAMN05444359_11762 | SAMN05444359_13334 | Hypothetical protein. | ADP-ribosylglycohydrolase. | 0.420 |
SEQ91907.1 | SER30291.1 | SAMN05444359_1194 | SAMN05444359_13333 | Nitrogen regulatory protein P-II family. | ADP-ribosylglycohydrolase. | 0.675 |
SEQ91907.1 | SER30315.1 | SAMN05444359_1194 | SAMN05444359_13334 | Nitrogen regulatory protein P-II family. | ADP-ribosylglycohydrolase. | 0.675 |
SEQ91907.1 | nadE | SAMN05444359_1194 | SAMN05444359_13335 | Nitrogen regulatory protein P-II family. | NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.527 |
SER06527.1 | SER30291.1 | SAMN05444359_1233 | SAMN05444359_13333 | Hypothetical protein. | ADP-ribosylglycohydrolase. | 0.400 |
SER06527.1 | SER30315.1 | SAMN05444359_1233 | SAMN05444359_13334 | Hypothetical protein. | ADP-ribosylglycohydrolase. | 0.734 |
SER30291.1 | SEQ91907.1 | SAMN05444359_13333 | SAMN05444359_1194 | ADP-ribosylglycohydrolase. | Nitrogen regulatory protein P-II family. | 0.675 |
SER30291.1 | SER06527.1 | SAMN05444359_13333 | SAMN05444359_1233 | ADP-ribosylglycohydrolase. | Hypothetical protein. | 0.400 |
SER30291.1 | SER30315.1 | SAMN05444359_13333 | SAMN05444359_13334 | ADP-ribosylglycohydrolase. | ADP-ribosylglycohydrolase. | 0.817 |
SER30315.1 | SEQ86001.1 | SAMN05444359_13334 | SAMN05444359_11761 | ADP-ribosylglycohydrolase. | Predicted nucleotidyltransferase. | 0.556 |
SER30315.1 | SEQ86020.1 | SAMN05444359_13334 | SAMN05444359_11762 | ADP-ribosylglycohydrolase. | Hypothetical protein. | 0.420 |
SER30315.1 | SEQ91907.1 | SAMN05444359_13334 | SAMN05444359_1194 | ADP-ribosylglycohydrolase. | Nitrogen regulatory protein P-II family. | 0.675 |
SER30315.1 | SER06527.1 | SAMN05444359_13334 | SAMN05444359_1233 | ADP-ribosylglycohydrolase. | Hypothetical protein. | 0.734 |
SER30315.1 | SER30291.1 | SAMN05444359_13334 | SAMN05444359_13333 | ADP-ribosylglycohydrolase. | ADP-ribosylglycohydrolase. | 0.817 |
SER30315.1 | nadE | SAMN05444359_13334 | SAMN05444359_13335 | ADP-ribosylglycohydrolase. | NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.404 |
nadE | SEQ91907.1 | SAMN05444359_13335 | SAMN05444359_1194 | NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | Nitrogen regulatory protein P-II family. | 0.527 |
nadE | SER30315.1 | SAMN05444359_13335 | SAMN05444359_13334 | NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | ADP-ribosylglycohydrolase. | 0.404 |