STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER29762.1Hypothetical protein. (453 aa)    
Predicted Functional Partners:
SER00896.1
Hypothetical protein.
  
 
   0.775
SEQ30664.1
Gliding motility-associated C-terminal domain-containing protein.
  
 
  0.703
SER13755.1
Hypothetical protein.
  
 
   0.697
SEP90954.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.691
SEP64263.1
Hypothetical protein.
  
     0.690
SEP84953.1
Cohesin domain-containing protein.
  
     0.685
SER23372.1
Por secretion system C-terminal sorting domain-containing protein.
  
 
  0.683
SEQ25198.1
Gliding motility-associated C-terminal domain-containing protein.
  
 
  0.679
SEQ74029.1
Hypothetical protein.
  
     0.677
SER13677.1
Autotransporter translocation and assembly factor TamB.
  
     0.669
Your Current Organism:
Lewinella agarilytica
NCBI taxonomy Id: 478744
Other names: DSM 24740, JBRI 2009, JCM 14216, KCTC 12774, L. agarilytica, Lewinella agarilytica Lee 2007, strain SST-19
Server load: low (28%) [HD]