STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER31198.1Hexosaminidase. (494 aa)    
Predicted Functional Partners:
SEQ82202.1
Por secretion system C-terminal sorting domain-containing protein.
    
 0.805
SEP88039.1
Beta-glucosidase.
    
  0.804
SEP64370.1
CubicO group peptidase, beta-lactamase class C family.
    
  0.770
SER34788.1
Hexosaminidase.
  
  
 
0.765
SEP73060.1
Predicted dehydrogenase.
  
     0.684
cutC
Copper homeostasis protein; Participates in the control of copper homeostasis. Belongs to the CutC family.
 
     0.664
SEQ34146.1
CubicO group peptidase, beta-lactamase class C family.
    
  0.625
SER19536.1
CubicO group peptidase, beta-lactamase class C family.
    
  0.625
SER14115.1
Glucosamine-6-phosphate deaminase.
 
   
 0.606
SER31216.1
D-alanyl-D-alanine dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide.
    
  0.581
Your Current Organism:
Lewinella agarilytica
NCBI taxonomy Id: 478744
Other names: DSM 24740, JBRI 2009, JCM 14216, KCTC 12774, L. agarilytica, Lewinella agarilytica Lee 2007, strain SST-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.