STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER43811.1Rhodanese-related sulfurtransferase. (191 aa)    
Predicted Functional Partners:
SEQ35945.1
Rhodanese-related sulfurtransferase.
  
     0.766
SER43761.1
Rhodanese-related sulfurtransferase.
 
     0.745
SER30602.1
Rhodanese-related sulfurtransferase.
  
     0.744
SEP68508.1
Prokaryotic molybdopterin-containing oxidoreductase family, iron-sulfur binding subunit.
    
 0.690
SEQ19857.1
Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
 
 0.681
SER30579.1
Rhodanese-related sulfurtransferase.
  
     0.681
ybeY
rRNA maturation RNase YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
    
   0.670
SEQ68868.1
FAD/FMN-containing dehydrogenase.
    
 0.651
SER43886.1
Glyoxylase, beta-lactamase superfamily II.
 
  0.633
SER43838.1
Por secretion system C-terminal sorting domain-containing protein.
       0.631
Your Current Organism:
Lewinella agarilytica
NCBI taxonomy Id: 478744
Other names: DSM 24740, JBRI 2009, JCM 14216, KCTC 12774, L. agarilytica, Lewinella agarilytica Lee 2007, strain SST-19
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