STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER47874.1Conserved repeat domain-containing protein. (889 aa)    
Predicted Functional Partners:
SEQ33496.1
Subtilase family protein.
  
 
  0.590
SEQ82202.1
Por secretion system C-terminal sorting domain-containing protein.
   
  0.568
SER34729.1
Serine protease, subtilisin family.
  
 
  0.545
SER31484.1
Por secretion system C-terminal sorting domain-containing protein.
 
 
  0.513
SEQ38490.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.483
SEP55884.1
Por secretion system C-terminal sorting domain-containing protein; Belongs to the peptidase S8 family.
    
  0.479
SEQ92924.1
PAP2 superfamily protein.
  
 
   0.440
SEQ59446.1
Subtilase family protein.
    
  0.435
SER03179.1
Hypothetical protein.
  
 
  0.413
SEQ97262.1
Helix-hairpin-helix domain-containing protein.
  
     0.400
Your Current Organism:
Lewinella agarilytica
NCBI taxonomy Id: 478744
Other names: DSM 24740, JBRI 2009, JCM 14216, KCTC 12774, L. agarilytica, Lewinella agarilytica Lee 2007, strain SST-19
Server load: low (18%) [HD]